BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021A04LP1|AL427697
(578 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1491 771 0.0
>3x_Contig1491
Length = 9571
Score = 771 bits (375), Expect = 0.0
Identities = 519/575 (90%)
Strand = Plus / Plus
Query: 4 attcgtatttcataagaggtaaagtwtgcgatcggttcatttgctttcttctcattattt 63
||||| ||||||||||||||||||| ||||||||| ||| |||| |||| ||||||| ||
Sbjct: 1559 attcgaatttcataagaggtaaagtatgcgatcggatcaattgcattctactcattaatt 1618
Query: 64 tcttwgagatattgccttttttgayacggatgtttcwttatgtgtwcattaygtwtagwt 123
|| |||||||||||||| |||| ||||||||||| |||||||| ||| | || ||| |
Sbjct: 1619 tcaaagagatattgcctttattgaaacggatgtttcattatgtgtacataaagtatagat 1678
Query: 124 gtcaggttttchyattttggccactctwttttgttgatttttcgggtatyattttkatag 183
||||||||||| |||| ||||||||| | | |||||||| |||| || |||| ||||
Sbjct: 1679 gtcaggttttcaaatttaggccactctatatagttgatttaacgggaataatttagatag 1738
Query: 184 aycccaaatctwggaccatagatttgacaatcgagtctgayagggacagatcagtcgtga 243
| ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 1739 aacccaaatctaggaccatagatttgacaatcgagtctgaaagggacagaacagtcgtga 1798
Query: 244 tttcctatyyytttyttccacatcagctaagtyaagtyactggytcactcgggataytga 303
|||| || ||| | ||||||||||||||| |||| ||||| |||||||||| | |||
Sbjct: 1799 tttcaaataaatttataccacatcagctaagtaaagtaactggatcactcgggaaaatga 1858
Query: 304 yagcctactctttytccagttattttttggyagaygatgctaacytatcatatcactctc 363
|||||||||||| |||||||||||||||| ||| ||||| ||| ||||||||||||||
Sbjct: 1859 aagcctactctttatccagttattttttggaagaagatgcaaacaaatcatatcactctc 1918
Query: 364 attatggatacaacaaaaaadaataadatgaacaagacattacaaatcatttctttggtt 423
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 1919 attatggatacaacaaaaaaaaataaaatgaacaagacattacaaatcatttctttggtt 1978
Query: 424 gggtcctctgcagccattcattgatcgaaccaggccatactccagtcttctcataaccat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1979 gggtcctctgcagccattcattgatcgaaccaggccatactccagtcttctcataaccat 2038
Query: 484 aagatctagctagttcttcagctgcttgagctctaatcccggcagcgcaaaagakaatca 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2039 aagatctagctagttcttcagctgcttgagctctaatcccggcagcgcaaaagaaaatca 2098
Query: 544 actccttatccgcagaaggctttgggatatggaaa 578
|||||||||||||||||||||||||||||||||||
Sbjct: 2099 actccttatccgcagaaggctttgggatatggaaa 2133
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.718 1.35
Gapped
Lambda K H
1.43 0.718 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2373
Number of Sequences: 1807
Number of extensions: 2373
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 578
length of database: 10,358,551
effective HSP length: 16
effective length of query: 562
effective length of database: 10,329,639
effective search space: 5805257118
effective search space used: 5805257118
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.8 bits)
S1: 11 (23.1 bits)
S2: 48 (99.2 bits)